BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Asclepias_syriaca_v0.3_proteins.fa
           43,035 sequences; 19,571,512 total letters



Query= Untitled_sequence

Length=376
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

AS07g009740.1.1(joined) (translated)                                  684     0.0  


>AS07g009740.1.1 (joined) (translated)
Length=431

 Score = 684 bits (1765),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 324/370 (88%), Positives = 349/370 (94%), Gaps = 1/370 (0%)

Query  7    RLVTSKSELDLDHPNIEDYLPSGSSINEPRGKLSLRDLLDISPTLTEAAGAIVDDSFTRC  66
            +L TS SELDLD PN+EDYLPSGS I+EPRGKL LRDLLDISPTLTEAAGAIVDDSFTRC
Sbjct  63   KLNTSSSELDLDRPNLEDYLPSGS-IHEPRGKLRLRDLLDISPTLTEAAGAIVDDSFTRC  121

Query  67   FKSNPPEPWNWNIYLFPLYCFGVVVRYCILFPLRCFTLAFGWIIFLSLFIPVNALLKGQD  126
            FKSNPPEPWNWN+YLFPL+C GVVVRY  LFPLR   L  GWIIFLS +IPV+ LLKG D
Sbjct  122  FKSNPPEPWNWNVYLFPLWCMGVVVRYLFLFPLRVIVLTIGWIIFLSCYIPVHLLLKGND  181

Query  127  RLRKKIERVLVEMICSFFVASWTGVVKYHGPRPSIRPKQVYVANHTSMIDFIVLEQMTAF  186
            +LRKK+ER LVE+ICSFFVASWTGVVKYHGPRPS+RPKQV+VANHTSMIDFI+LEQMTAF
Sbjct  182  KLRKKLERCLVELICSFFVASWTGVVKYHGPRPSMRPKQVFVANHTSMIDFIILEQMTAF  241

Query  187  AVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVAKKLRDHVQGADSNPLLIFPEG  246
            AVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVA+KLR+HV+GAD+NPLLIFPEG
Sbjct  242  AVIMQKHPGWVGLLQSTILESVGCIWFNRSEAKDREIVARKLREHVEGADNNPLLIFPEG  301

Query  247  TCVNNNYTVMFKKGAFELDCTVCPIAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVC  306
            TCVNN+YTVMFKKGAFEL CTVCP+AIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVC
Sbjct  302  TCVNNHYTVMFKKGAFELGCTVCPVAIKYNKIFVDAFWNSRKQSFTMHLLQLMTSWAVVC  361

Query  307  EVWYLEPQTIRPGETGIEFAERVRDMISLRAGLKKVPWDGYLKYSRPSPKHSERKQQSFA  366
            +VWYLEPQT++PGET IEFAERVRD+IS+RAGLKKVPWDGYLKYSRPSPKH ERKQQSFA
Sbjct  362  DVWYLEPQTLKPGETPIEFAERVRDIISVRAGLKKVPWDGYLKYSRPSPKHQERKQQSFA  421

Query  367  ESILARLEEK  376
            ES+L RLEEK
Sbjct  422  ESVLHRLEEK  431



Lambda      K        H        a         alpha
   0.324    0.138    0.438    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 4106077184


  Database: Asclepias_syriaca_v0.3_proteins.fa
    Posted date:  Jun 11, 2021  2:00 PM
  Number of letters in database: 19,571,512
  Number of sequences in database:  43,035



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40