TBLASTN 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Asclepias_syriaca_v0.3_CDs.fa
           43,035 sequences; 58,839,933 total letters



Query= AS06g010300.1.1

Length=463
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

AS06g010300.1.1(joined)                                               877     0.0  


>AS06g010300.1.1 (joined)
Length=1392

 Score = 877 bits (2265),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 463/463 (100%), Positives = 463/463 (100%), Gaps = 0/463 (0%)
 Frame = +1

Query  1     MGLPEMEAMASTIGVSVPVLRFLLCFVATIPVSFFHRFVPGVTGRHLYAAVSGAVLSYLS  60
             MGLPEMEAMASTIGVSVPVLRFLLCFVATIPVSFFHRFVPGVTGRHLYAAVSGAVLSYLS
Sbjct  1     MGLPEMEAMASTIGVSVPVLRFLLCFVATIPVSFFHRFVPGVTGRHLYAAVSGAVLSYLS  180

Query  61    FGFSSNLHFLVPMLLGYASMVLCRKYCGIITYFLGFGYLIGCHVYYMSGDAWKEGGIDAT  120
             FGFSSNLHFLVPMLLGYASMVLCRKYCGIITYFLGFGYLIGCHVYYMSGDAWKEGGIDAT
Sbjct  181   FGFSSNLHFLVPMLLGYASMVLCRKYCGIITYFLGFGYLIGCHVYYMSGDAWKEGGIDAT  360

Query  121   GALMVITLKIISAVINYNDGLCKEENLRESQKKNRLIKLPSLLEYFGYCLCCGSHFAGPV  180
             GALMVITLKIISAVINYNDGLCKEENLRESQKKNRLIKLPSLLEYFGYCLCCGSHFAGPV
Sbjct  361   GALMVITLKIISAVINYNDGLCKEENLRESQKKNRLIKLPSLLEYFGYCLCCGSHFAGPV  540

Query  181   YEMKDYLDWIERKGIWQPSEKGSPSPYLPTLRALIQAAVCMGLYLYLVPQFPLSRFNHPI  240
             YEMKDYLDWIERKGIWQPSEKGSPSPYLPTLRALIQAAVCMGLYLYLVPQFPLSRFNHPI
Sbjct  541   YEMKDYLDWIERKGIWQPSEKGSPSPYLPTLRALIQAAVCMGLYLYLVPQFPLSRFNHPI  720

Query  241   YQEWGFWKRLGYQYMSGFTARWKYYFiwsiseasiiisGLGFSGWTDSSPHKPRWDRAKN  300
             YQEWGFWKRLGYQYMSGFTARWKYYFIWSISEASIIISGLGFSGWTDSSPHKPRWDRAKN
Sbjct  721   YQEWGFWKRLGYQYMSGFTARWKYYFIWSISEASIIISGLGFSGWTDSSPHKPRWDRAKN  900

Query  301   VDVLGVELAKSSVQLPLVWNIQVSTWLRHYVYDRLVQNGKKPGFLQLLATQTVSAVWHGL  360
             VDVLGVELAKSSVQLPLVWNIQVSTWLRHYVYDRLVQNGKKPGFLQLLATQTVSAVWHGL
Sbjct  901   VDVLGVELAKSSVQLPLVWNIQVSTWLRHYVYDRLVQNGKKPGFLQLLATQTVSAVWHGL  1080

Query  361   YPGYLIFFVQSALMIAGSRVLYRWQQATSTTVLKNFFVLMNFAYTLLVLNYSCVGFLVLS  420
             YPGYLIFFVQSALMIAGSRVLYRWQQATSTTVLKNFFVLMNFAYTLLVLNYSCVGFLVLS
Sbjct  1081  YPGYLIFFVQSALMIAGSRVLYRWQQATSTTVLKNFFVLMNFAYTLLVLNYSCVGFLVLS  1260

Query  421   LHETLASYGSVYYVGTiipilliilskiikpakpsRSKARKEQ  463
             LHETLASYGSVYYVGTIIPILLIILSKIIKPAKPSRSKARKEQ
Sbjct  1261  LHETLASYGSVYYVGTIIPILLIILSKIIKPAKPSRSKARKEQ  1389



Lambda      K        H        a         alpha
   0.326    0.141    0.458    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5373421557


  Database: Asclepias_syriaca_v0.3_CDs.fa
    Posted date:  Jun 11, 2021  2:00 PM
  Number of letters in database: 58,839,933
  Number of sequences in database:  43,035



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40