BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Asclepias_syriaca_v0.3_proteins.fa
           43,035 sequences; 19,571,512 total letters



Query= Untitled_sequence

Length=124
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

AS11g024750.1.1(joined) (translated)                                  245     5e-83


>AS11g024750.1.1 (joined) (translated)
Length=309

 Score = 245 bits (626),  Expect = 5e-83, Method: Compositional matrix adjust.
 Identities = 117/119 (98%), Positives = 118/119 (99%), Gaps = 0/119 (0%)

Query  6    FSFSTLPSFLKYLKAPRYFFFNKEDKFADPMALEALNSPTTPTPPVFQYENATLRYSIDQ  65
            FSFSTLPSFLKYLKAPRYFFFNKEDKFADPMALEALNSPTTPTPPVFQYENATLRYSIDQ
Sbjct  6    FSFSTLPSFLKYLKAPRYFFFNKEDKFADPMALEALNSPTTPTPPVFQYENATLRYSIDQ  65

Query  66   PWTKGKRSKRARSVEQPQPTEEEYLAWCLIMLARGGADAGGRSGGGASTLPAPPPPPPT  124
            PWTKGKRSKRARSVEQPQPTEEEYLAWCLIMLARGGA AGGRSGGGASTLP+PPPPPPT
Sbjct  66   PWTKGKRSKRARSVEQPQPTEEEYLAWCLIMLARGGAGAGGRSGGGASTLPSPPPPPPT  124



Lambda      K        H        a         alpha
   0.316    0.135    0.422    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 533744308


  Database: Asclepias_syriaca_v0.3_proteins.fa
    Posted date:  Jun 11, 2021  2:00 PM
  Number of letters in database: 19,571,512
  Number of sequences in database:  43,035



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40