BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Asclepias_syriaca_v0.3_chromosomes.fa 673 sequences; 317,062,912 total letters Query= Untitled_sequence Length=4572 Score E Sequences producing significant alignments: (Bits) Value Scaff446 2137 0.0 AS0.3ch02 1832 0.0 >Scaff446 Length=25000 Score = 2137 bits (1157), Expect = 0.0 Identities = 1496/1644 (91%), Gaps = 85/1644 (5%) Strand=Plus/Minus Query 1 GTTCCTGAGAGTCAGTTTCTCATCTCACAGACCGTCATGTTTAGATACTGCCAAGCACAT 60 ||||||||||| || |||| | |||||||| ||||||||| |||| |||||||||||||| Sbjct 1647 GTTCCTGAGAGGCAATTTCGCTTCTCACAGGCCGTCATGTCTAGAGACTGCCAAGCACAT 1588 Query 61 TGACATTGAGCATCATATTGTCTATAATGTTTTTCCTGTAAGC-GTCTTTTTGTTTCATT 119 ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 1587 TGACATTGAGCATCATATTGTCTATAATGTTTTTCCTGTAAGCATTCTTTTTGCTTCATT 1528 Query 120 TCTGAAATTTTCTGGTAGTATGATAAAGTTCAT---TTG-AGGAGGATATTTCCTATATT 175 ||||||||||||||||| ||||||||||| ||| ||| ||||||||| |||||||||| Sbjct 1527 TCTGAAATTTTCTGGTAATATGATAAAGTGCATAGTTTGAAGGAGGATAGTTCCTATATT 1468 Query 176 TCATATAATGCATACTTTATTAATATAACAGAGGTCCTCCAACTTCTGATATTACTGTAT 235 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1467 TCATATAATGCAGACTTTATTAATGTAACAGAGGTCCTCCAACTTCTGATATTACTGTAT 1408 Query 236 CT----------CA-TA--TACATATA--TCTCTACAGGTTGGACAGCCAGAACTCATTG 280 || || || |||||||| |||||||||||||||||||||||||| |||| Sbjct 1407 CTGATATATCTTCATTACTTACATATATCTCTCTACAGGTTGGACAGCCAGAACTTATTG 1348 Query 281 CTCTGGAGAAAGCACTGAAAACAGCCTTGCTTCCTGCTGGCTCAGCCAGAGAGGTAACAA 340 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1347 CTCTGGAGAAAGCACTGAAAACAGCCTTGCTTCCTGCTGGCTCTGCCAGAGAGGTAACAA 1288 Query 341 CACTTGGTGCTAAAAA-TCCAGGTTTTTATTTCCCCAAGATAAATGCTTGTTTTATGAAT 399 | |||| ||||||||| ||| |||||| || || | | | ||| Sbjct 1287 CTCTTGTTGCTAAAAAATCCTGGTTTT-AT--------GA-A--T---------A-GAA- 1251 Query 400 AGAAAAAATTGTGAAGCCTTTTTTTCTTGCAGTCTGATTTTGGGATGGAAGTCCCTTTGT 459 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1250 A-AAAC--TTGTGAAGCCTTTTCTTCTTGCAGTCTGATTTTGGGATGGAAGTCCCTTTGT 1194 Query 460 TTGAGGTAGAAGCAACAGTTGTGGAGTCAGAGTTTCAGAGGCTATATTCCTACCTGTTTG 519 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1193 TTGAGGCAGAAGCAACAGTTGTGGAGTCAGAGTTTCAGAGGCTATATTCCTACCTGTTTG 1134 Query 520 ACTTGGAGAACAAAGCATATTCTTCAGAGGAGATTGACAAACCTTGGCCAAATGCAATTT 579 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 1133 ACTTGGAGAACAAAGCACATTCTTCAGAGGAGATTGACAGACCTTGGCCAAATGCAATTT 1074 Query 580 TTATTGTTAATTTTGATAAGGTATTGTTCATATAACATCATGA-ATTAGTCAGGTATTGA 638 ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| Sbjct 1073 TTATTGTTAATTTTGATAAGGTACTGTTCATATAACATCATGATATT-GTCAGGTATTGA 1015 Query 639 AGATAGATATAGTTCATATATTTTAGCACCAATATGGTCTAAAAAAATTTTCCATCTGGT 698 ||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| || Sbjct 1014 AGATAGATATATTTCATATATTTTAGCAC-AATATGGTCTAAATTTTTTTTCCATCTCGT 956 Query 699 GTATATTTGTTTATTCATAGGTAAGAGTTGATCCTAGGAACAAGGATATTGATCTTGATA 758 | |||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 955 GGATATTTGTTTAT----AGGTAAGAGTTGATCCTAGGAACAAGGATATTGATCTTGACA 900 Query 759 GTTTGATGTATGGAAGAATCACGCAGCTCAATGAAGAAGAGATGAAAAAGCAAGAGAGTG 818 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 899 GTTTGATGTATGGAAGAATCACACAGCTCAATGAAGAAGAGATGAAAAAGCAAGAGAGTG 840 Query 819 GATACATTTATCGTTATCGTTATAATGGTGGGGGAGCAACTCAGGTTTGGCTCAGCTCTG 878 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 839 GATACATTTATCGGTATCGTTATAATGGTGGGGGAGCAACCCAGGTTTGGCTCAGCTCTG 780 Query 879 GCAGGTATAGTTGCTTGAACATCCATTTTTGGATTTCTTGAGGTCATATTTCTCAATTGT 938 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 779 GCAGGTATAGTTGCTTGAACATCCATTTTTGGATTTCTTGTGATCATATTTCTCAATTGT 720 Query 939 GGAAATATAGTTCCTGTCAAAGATTTTAGC-ACTTGGTTTTTGTATGAAAAGAGCACTGT 997 |||| || | ||||||||||||||| || ||||||||||||||||||||||||| ||| Sbjct 719 GGAA-TAGA--TCCTGTCAAAGATTTCAGATACTTGGTTTTTGTATGAAAAGAGCATTGT 663 Query 998 TTGTAGATTATTCTAAGAGGGTTTGTTAGGTGGACATTTGTAGAAGCTTTTATAGAACTG 1057 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 662 TTGTAGATAATTCTAAGACGGTTTGTTAGGTGGACATTTGTAGAAGCTTTTACAGAACTG 603 Query 1058 ATGATTTAAGAAGATTTTT-TGCATCTATTGT-------------------------CCT 1091 ||||||||||| ||||||| |||||||||||| ||| Sbjct 602 ATGATTTAAGATGATTTTTCTGCATCTATTGTACTGTCTCCTGTTAAAAGATTTTCACCT 543 Query 1092 GGAATTTCCAAAAGCATTTTGAAGTTACTCTACTCTTTTACTTAGTTTGCCAAAATTGTC 1151 ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| || Sbjct 542 GGAATTTCCAAAAGCATTTTGCAGTTACTCTACTCTTTTACTTAGTTAGCCAAAATTTTC 483 Query 1152 ATGGTTTCAGGTTTGTTGTGATTGATCTCTCTGCTGGCCCTTGTACATATGGAAAAATTG 1211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 482 ATGGTTTCAGGTTTGTTGTGATTGATCTCTCTGCTGGCCCTTGTACATATGGAAAAATTG 423 Query 1212 AAACTGAAGAAGGAACTGTCAGTTCTAAAACACTCCCTCGTTTACAGAAGGTTCTGTTTC 1271 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 422 AAACTGAAGAAGGAACTGTTAGTTCTAAAACACTCCCTCGTTTACAGAAGGTTCTGTTTC 363 Query 1272 CAAGAGGGTCAAGTTTCACTAGTGAGCCTTCAGCCCATGATGTCTTCATTGGACAGCTTA 1331 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 362 CAAGAGGGTCAAGTTTCACTAGTGAGCCTTCAGCCCATGATGTCTTCATTGGACAGCTTG 303 Query 1332 GTGCTCTGGTTGCAACTACAGTAGAGCATGTCATTGCTCCAGATGTTCGGTATGGTCATT 1391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 GTGCTCTGGTTGCAACTACAGTAGAGCATGTCATTGCTCCAGATGTTCGGTATGGTCATT 243 Query 1392 AATTAAATTCATATGTCATCTGCATTCTGTAAACTGAGGATACTCAAGATTTCTTCACAA 1451 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 242 AATTAAATTCATATGTCATCTGCATTCTGTAAACTGAGGACACTCAAGATTTCTTCACAA 183 Query 1452 GCATTGAGGATTTATTGGCATGTACTTCACATATCTCCTTGTTTTCTATGACCCATGCAG 1511 ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 182 GCATTGAGGGATTATTGGCATGTACTTCACATATCTCCTCGTTTTCTATCACCCATGCAG 123 Query 1512 GAAGTTGAGAGTAGTTGTACTGAAAGAATATAATACATTTACTGAGTATACCAA-GTCTT 1570 || |||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||| Sbjct 122 GATGTTGAGAGTAGTTGTACTGAAAGAATATAATATATTTACCGAGTTTACCAAAGTCTT 63 Query 1571 TTATTATGTTGAACTTCTGAAGAA 1594 || | || |||||||||||||||| Sbjct 62 TTGTAATCTTGAACTTCTGAAGAA 39 >AS0.3ch02 Length=30841828 Score = 1832 bits (992), Expect = 0.0 Identities = 1441/1643 (88%), Gaps = 89/1643 (5%) Strand=Plus/Plus Query 1592 GAAATAATTTATGTTGTCTTGCCTTTTCAGGTTAGGAAGATGGTTCACCAGGGACAAGAT 1651 |||||||||| ||||||||||||| ||||| |||||||||||||||||| ||||||||| Sbjct 311492 GAAATAATTTGTGTTGTCTTGCCTATTCAGCTTAGGAAGATGGTTCACCGGGGACAAGAG 311551 Query 1652 TTAGTAATTGTGGGAGGTACACATGCATTACATAGCCATGAGAGGCTTGCAATTGCAGTT 1711 ||||||||| ||||| | |||||||||||||| |||||||| |||||| ||||||||| Sbjct 311552 GTAGTAATTGCGGGAGCTGCACATGCATTACATCACCATGAGAAGCTTGCTATTGCAGTT 311611 Query 1712 TCAAAAGCAATGAGGGGTCACTCCCTGCAAGAAACCAAGAAGGATGGGCGTTTCCATGTT 1771 |||||||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 311612 TCAAAAGCAACGAGGAGTCATTCCCTGCAAGAAACCAAGAAGGACGGGCGTTTCCATGTT 311671 Query 1772 CATACAAGGACGTACTTGGATGGTTCTATCCTTAAAGAGGTATTTTCC-TTGCATA---- 1826 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 311672 CATACAAGGACATACTTGGATGGTTCTATCCTTAAAGAGGTATTTTCCCTTGCATATTTT 311731 Query 1827 --TCTTAAAGGGCTACCAGTGCAATGACCAAGATGCTTATACGAGTTTTACATTGAACAG 1884 ||||||| ||||| || | ||||||||||||| ||||||||||||||||| ||| Sbjct 311732 CTTCTTAAATGGCTA-----GC-AGGACCAAGATGCTTGTACGAGTTTTACATTGAGCAG 311785 Query 1885 AATTTATTTCATTTTTCTTCTCATGGTATCCTTTCCCTTTAATTGAAACATTATCTTCGT 1944 ||||| ||||||||||||||| || |||||||||||||| |||||||||||||||||||| Sbjct 311786 AATTTGTTTCATTTTTCTTCTTATAGTATCCTTTCCCTTAAATTGAAACATTATCTTCGT 311845 Query 1945 GACATGGGTTCCCTTATTCATTTATTTAATGGCACACACACTTCCTGATAGCTTTTTGGC 2004 | ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 311846 GTTATGGGTTCCCTTATTCATTTATTTAATGG--CACACACTTCCTGGTAGCTTTTTGGC 311903 Query 2005 TATTCAACTTTGTTTCTATCTTCTTGATATAATTCTTCATAGTAAAAATTGCTGATCCTA 2064 ||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||| Sbjct 311904 TATTCAACTTTGTTTCTATCTTCTTGATACAATTCTTCATATTAAAAATCGCTGATGCTA 311963 Query 2065 GGAAATGGTGCGGTCTGCTGATGTTCTTGCTGCTGGTCTCCTTGAGGTTTCTGATCCATC 2124 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 311964 GGAAATGGTGCGGTCTGCTGATGTTCTTGCTGCTGGTCTCCTTGAGGTTTCTGACCCATC 312023 Query 2125 CCTTACAGATAAATATTACCTTAAACAGGTAAGTATCAAATAGCTTAAAATTTAAGGAGT 2184 ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 312024 CCTTAAGGATAAATTTTACCTTAAACAGGTAAGTATCAAAAAGCTTAAAATTTAA-GAGT 312082 Query 2185 ATTTGGTTTGGGATGTGGTGTTTTTATCTGAACATTGCCTTCACACTGACTGAGACTTTC 2244 || || ||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 312083 ATATGATTTGGAATGTGGTGTTTTTATCTGAACATTGCCTTCACACTGACTGAGAC--TC 312140 Query 2245 TGTTTCTAATTTTGAGTTCTGCAGAACTGGATGGATTACACTTTTAGTACAAACGATTCT 2304 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 312141 TGTTTATAATTTTGAGTTCTGCAGAACTGGATGGATTACACTCCTAGTACAAACGATTCT 312200 Query 2305 ATTATAAAACACAAGCCTCTCTGGACTATGTATGGCCCTACAAGGTTAAAGGACAAAAAA 2364 |||||||| |||||||||||||||| |||||||| |||||| |||||||| |||||| Sbjct 312201 ATTATAAAGCACAAGCCTCTCTGGAATATGTATGATTCTACAACGTTAAAGGGGAAAAAA 312260 Query 2365 AAGATTGCAGCAATGAGGACACAAGGGGGTTTACACCGTACCTATGGAACTAGAGTCATT 2424 ||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| || Sbjct 312261 AAGATTGCAGCAATGAGGAAACAAGGGGATTTACACCGTACCTACGGAACTAGAGT--TT 312318 Query 2425 CCAGTGTAAGCACATGATCCAATTCTTAAAATTTTCACAAGC-AGCTTAATATTGTCTTA 2483 |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | Sbjct 312319 CCAGTGTAAGCACATGATCCAATTCTTAAAATTTTCACAAGCAAGCTTAATATGGTCTCA 312378 Query 2484 AATTCTGCATTTGGCTGGTAATATATCTTAATATTTCATTGTGAAGAGGATATTCTGGGT 2543 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 312379 AATTCTGCATTTGGCTGGTAATATATCTTAATATTTCATTGTGGAGAGGACATTCTGGGT 312438 Query 2544 T-CTATGCT----------------TGCCTACATTTCTTGTATGTGTTTGAAGTTGTATA 2586 | ||||||| |||||| ||||||||| ||||||| ||||||||| Sbjct 312439 TTCTATGCTTATTAATCACAAAATGTGCCTATATTTCTTGTTAGTGTTTG-AGTTGTATA 312497 Query 2587 CATCTAAGTAGGCAAATTGAG-ATG--TTGC-TTTTTGGTAATGTTGTTTCAGC-AGGAA 2641 |||||||||||| |||||||| || ||| ||||||||||| ||||||||| ||||| Sbjct 312498 CATCTAAGTAGGTAAATTGAGGATACATTGTATTTTTGGTAATAATGTTTCAGCAAGGAA 312557 Query 2642 TTGAGAAAGATGTACTGAGTAA-ATCAAAGAGTTCCTCTTTTATTAAAT-ATAG--TTGT 2697 |||| ||| |||| | | || || | ||||| ||| | ||||| | || || Sbjct 312558 CTGAGTAAGCTGTATT-ATTATTATTATTTTTTTCCT-TTTGAGTAAATCAAAGAGTTCC 312615 Query 2698 TATATT-C--TTAATATCTTCTTCCTACC--ATT-C-ACCAAATTTGAGCTTGTCATTTT 2750 | | || | || ||| ||||| || | ||| | |||| || | | | |||| Sbjct 312616 TCTTTTACAGTTGTTATATTCTTAATATCTTATTTCTACCA--TTC-A--T-GAAATTTG 312669 Query 2751 ATGACCTTTTCTTGGTGCTACTTTTTCTCTAGTTTAACCATATTTTTCCGATGTACTAAA 2810 | | ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 312670 AGG---TTTTCTTGGTGCTACTTTTTCTCTAGTTTAACCATATTTTTCCAATGGACTAAA 312726 Query 2811 AGCATTGTCTAA-TTCGAATGCAATTATTTCCTGATTGCAGCTATGTTCTATCTTTAGCT 2869 |||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||| Sbjct 312727 AGCATTGTCTAACTTCAAATGCAATTATTTCCTGAATGCAGCTTTGTTCTATCTTTAGCT 312786 Query 2870 GATGTGGATGAACAGCTCATGATGGAAGATGAAAGCCTTGTATGGACGAGTAATGATGTA 2929 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 312787 GATGTGGATGAACAGCTCATGATGGAAGGTGAAAGCCTTGTATGGACGAGTAATGATGTA 312846 Query 2930 GTCATAGTTCTTCAGCATTTAAATAAACAGATACCCTTGAGGTTAGTGGACTTTCTTTAG 2989 |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 312847 GTCATAGTTCTTCAACATTTAAATAAACAGATACCCTTGAGGTAAGTGGACTTTCTTTAG 312906 Query 2990 CTTGCATTGGTCTGATTCTCTTGAACAGTTTGT-----CTCTTCCCTTTTTCTCTTCGTT 3044 ||||||||||||||||||||||||||||||||| |||||| |||||||||| ||| Sbjct 312907 CTTGCATTGGTCTGATTCTCTTGAACAGTTTGTTTCACCTCTTCTTTTTTTCTCTTTGTT 312966 Query 3045 TC----------TGCGTTTGGTTTTAGATTTTCTTTCATGGATTGTGCTTGAAAATAGAT 3094 || ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 312967 TCTGCTTTTTGTTGCGTTTGGTTTTAGATTTTCTTTCCTGGATTGTGCTTGAAAATAGAT 313026 Query 3095 AACATGAGGAGAG-G-A-A-GATGGTGACATGCTGTCACAAGAATTTC--TTTGACAGTG 3148 ||||||||||||| | | | ||||||| ||||||| ||| ||||||| |||||||||| Sbjct 313027 AACATGAGGAGAGTGTACAAGATGGTGGAATGCTGTGACATGAATTTCTTTTTGACAGTG 313086 Query 3149 GAACAATTTCTGTTACATAAGTG 3171 ||||||||||||||||||| ||| Sbjct 313087 GAACAATTTCTGTTACATA-GTG 313108 Score = 1279 bits (692), Expect = 0.0 Identities = 991/1125 (88%), Gaps = 61/1125 (5%) Strand=Plus/Plus Query 3482 CATTCAACATCGAAAGAAAAAAATT-GTTA-TCACATAATGTATATTGTGAAAGAGAATA 3539 || |||||||| ||||| ||||||| | || ||||||||||||||||||||||||| | Sbjct 313417 CACTCAACATCAAAAGATAAAAATTCGATATTCACATAATGTATATTGTGAAAGAG---A 313473 Query 3540 ACATTTTTTCATGGCTCTCTTCCACTGTCAATATTCTTGGATGTGATTTCTTTTCTCATT 3599 |||||||||||||||||||||||| |||| | ||| | || | | || || | Sbjct 313474 ACATTTTTTCATGGCTCTCTTCCATTGTC--TTTTC-T-CAT-T-A--TC---ACT--TA 313520 Query 3600 TTCACTTATGTCCTTTCCTCAAAGGAACTATATTCTAATGACTTGGTTCTTTCTGCACAG 3659 | | ||| | | | || || || ||| |||||||||||||||||||||||||| ||||| Sbjct 313521 TGCCCTT-T-TTC-TT-CT-GAA-GAAATATATTCTAATGACTTGGTTCTTTCTCCACAG 313574 Query 3660 AGGAACACAATATATGCTCGCGTTGATGCTGCACTTCACTTAATCAGAGCTACATCAGAG 3719 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct 313575 AGGAACTCAATATATGCTCGCGTTGATGCTGCACTTCACATAATCAGAGCTACATCTGAG 313634 Query 3720 GTGAGATT--AT-AT--CTTG---G-CTAGTGATGCATTTTACTTTCAACCCTGTCAATA 3770 |||||||| || | |||| | ||||||| ||||||||||||||||| |||||| Sbjct 313635 GTGAGATTGTATCTTGCCTTGCCTGCCTAGTGAGACATTTTACTTTCAACCC-GTCAATC 313693 Query 3771 CTGACTGTACTTCTACTTC-TTTTGGGGGCTAGTCTGTTCAAACCTTTGCCACTGATTAT 3829 |||||||||||| |||||| ||||||| |||||||||||||||| ||||||||||||||| Sbjct 313694 CTGACTGTACTTTTACTTCTTTTTGGGTGCTAGTCTGTTCAAACATTTGCCACTGATTAT 313753 Query 3830 CTGAAGACTCCCCTTGGAGAACCAGTAAAAGGTAAGAAGAACAAAACAAACACTGAGCTA 3889 |||| |||||| ||||||||||||||||| |||||||| ||||| |||| |||||||||| Sbjct 313754 CTGAGGACTCCTCTTGGAGAACCAGTAAAGGGTAAGAAAAACAAGACAAGCACTGAGCTA 313813 Query 3890 TGGTTGGAAAAGTTTTATAAGAAAACCACCAACTTACCAGAACCATTTCCTCACGAATTG 3949 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 313814 TGGTTGGAAAAGTTTTATAAGAAAACCACCAATTTACCAGAACCATTTCCTCACGAATTG 313873 Query 3950 GTCGAGCGGTTGGAAAATTACCTGGAAGTAAGTTTACTCTTCGTTGAACTAATTGTGC-C 4008 |||||||| ||||||||||||||||| ||||||| | |||| ||| || || ||| | Sbjct 313874 GTCGAGCGCTTGGAAAATTACCTGGATGTAAGTTCAATCTTTGTTTAATCAACTGTACTA 313933 Query 4009 CTT--CTTTACAAAGTTGCCAGCATTTTTCAAATACTCACTCGTCCTTTTGAATAACAGG 4066 ||| ||||||||||||||||||||||| | ||| ||||||| ||||||||||||| Sbjct 313934 CTTACCTTTACAAAGTTGCCAGCATTTTGCCTATAGTCACTCG----TTTGAATAACAGG 313989 Query 4067 GCATTGAAGATCAGCTTGTAGGCTTGTCTTCTCTACTGTATGATCACAGGCTACAAGAAG 4126 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| Sbjct 313990 GCATTGAAGATCAGCTTGTAGGTTTGTCTTCTCTTCTGTATGATCACAGGCTACGTGAAG 314049 Query 4127 CAAACATGAATAGTTCATATATTCTGCAGAGTGCCTTCCTAACCCAGCAGTAAGTTCTCA 4186 |||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 314050 CAAACACGAATAGTTCACATATCCTGCAGAGTGCCTTCCTAACCCAGCAGTAAGTTCTCA 314109 Query 4187 TCTCTTTAATTCTCTGGTAACTTAAATCTTTGGTGTTCTTCTTGGCTGACATCTTCTATC 4246 |||||| |||||||||||||||| |||||||| | |||||||| |||||||| ||| ||| Sbjct 314110 TCTCTTAAATTCTCTGGTAACTTGAATCTTTGATATTCTTCTTCGCTGACATTTTCAATC 314169 Query 4247 ATTTCCC-TACAGGTATGTAGATCATGTTCTTGAAGTTGAGAGGGAAAAAATGAAGTGCT 4305 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 314170 ATTTCCCTTACAGGTATGTAGATCATGTTCTTGATATTGAGAGGGAAAAAATGAAGTGCT 314229 Query 4306 GCAGTATCGTTTATGGAAAACTAAAACAGACTTCACAAAATTTCATTTATGCTGGAATTC 4365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 314230 GCAGTATCGTTTATGGAAAACTAAAACAGACTTCACAGAATTTCATTTATGCTGGAATTC 314289 Query 4366 TCTTAGCTGGCTTTATTGTTTACTTTGCTGTAATCTTCTTCTCATCACCGGTTCGCTGAT 4425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 314290 TCTTAGCTGGCTTTATTGTTTACTTTGCTGTAATCTTCTTCTCATCACCGGTTCGCTGAT 314349 Query 4426 CTAATGAGACTTGTTTAAACAATAAATAGT---A--A-GTTCC---------AGATATAG 4470 ||||||| |||||||||||||||||||||| | | ||||| |||||||| Sbjct 314350 CTAATGACACTTGTTTAAACAATAAATAGTTTCATTAAGTTCCAGATAGATTAGATATAG 314409 Query 4471 ATTTTATGTATTACTCACAATTTTGAGGAAGAGAAACAAGGGTTTTCCCTTTCTTGCACA 4530 |||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 314410 ATTTTATGTATTTCACACAATTTTGAGGAGGAGAAACAAGGGTTTTCCCTTTCTTGCACA 314469 Query 4531 TGGCAATGTACATTAACTCTTCATATATAATT-T-T-TCACCTTT 4572 |||||||||||||| ||| |||||||||| | | |||||||| Sbjct 314470 GGGCAATGTACATTATCTCGCAATATATAATTATCTCTCACCTTT 314514 Score = 446 bits (241), Expect = 7e-123 Identities = 271/286 (95%), Gaps = 0/286 (0%) Strand=Plus/Plus Query 3165 ATAAGTGGTTCTCATTCTGCCTCCTTACCTTGGCAGTTACGTTTCAGAAGTAGAGAGAAG 3224 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct 313136 ATAAGTGGTTCTCATTCTGCCCCATTACCTTGGCAGTTACGTTTCAGAAGTGGAGAGAAG 313195 Query 3225 ACACGCCATTCCATCGGAAGCACATAGACATATATTGGCAGGGTTAGCTTCTGTTGTGGG 3284 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 313196 ACACGCCATTCCATCAGAAGCACATCGACATATATTGGCAGGGTTAGCTTCTGTTGTGGG 313255 Query 3285 TGGACTAAGTGCGCCATTTGAAAAGGCTTCCCATGTGCATGAAAGACCTACCGTCAACTG 3344 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 313256 TGGACTAAGTGCACCATTTGAAAAGGCTTCCCATGTGCATGAAAGACCTGTGGTCAACTG 313315 Query 3345 GCTATGGGCAGCTGGTTGCCATCCCTTTGGACCATTTTCCAACACTTCCAAAATCAGTCA 3404 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 313316 GCTATGGGCTGCTGGTTGCCATCCCTTTGGACCATTTTCCAATACTTCCAAAATCAGTCA 313375 Query 3405 ATTGCTTCAGGATGTTGCTCTGGTATGTCCTAACATAGCATCTCTC 3450 | ||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct 313376 AATGCTTCATGATGTTGCCCTGGTATGTCCTAACATAGCATCACTC 313421 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 1440328143485 Database: Asclepias_syriaca_v0.3_chromosomes.fa Posted date: Jun 11, 2021 1:59 PM Number of letters in database: 317,062,912 Number of sequences in database: 673 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5