TBLASTN 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: Asclepias_syriaca_v0.3_CDs.fa
           43,035 sequences; 58,839,933 total letters



Query= AS10g012000.1.1

Length=285
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

AS10g012000.1.1(joined)                                               550     0.0   
AS10g012160.1.1(joined)                                               478     5e-172


>AS10g012000.1.1 (joined)
Length=855

 Score = 550 bits (1417),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 285/285 (100%), Positives = 285/285 (100%), Gaps = 0/285 (0%)
 Frame = +1

Query  1    MEGNGELNHHHHQSTESTRAKEFKGQRGPLIPTVLAMFIWLGAIHFNAIVVLASFIFLPI  60
            MEGNGELNHHHHQSTESTRAKEFKGQRGPLIPTVLAMFIWLGAIHFNAIVVLASFIFLPI
Sbjct  1    MEGNGELNHHHHQSTESTRAKEFKGQRGPLIPTVLAMFIWLGAIHFNAIVVLASFIFLPI  180

Query  61   YKAfiviglllvfiliPIEEKSELGRRLSKYICKYASGYFPVSLYVEDYEAFDPNQAYAF  120
            YKAFIVIGLLLVFILIPIEEKSELGRRLSKYICKYASGYFPVSLYVEDYEAFDPNQAYAF
Sbjct  181  YKAFIVIGLLLVFILIPIEEKSELGRRLSKYICKYASGYFPVSLYVEDYEAFDPNQAYAF  360

Query  121  GYEPHSVLPIGVIAFATFTGFMPLPKIKVLASTAVFYTPFLRQEKFISLLASGYSCIIVP  180
            GYEPHSVLPIGVIAFATFTGFMPLPKIKVLASTAVFYTPFLRQEKFISLLASGYSCIIVP
Sbjct  361  GYEPHSVLPIGVIAFATFTGFMPLPKIKVLASTAVFYTPFLRQEKFISLLASGYSCIIVP  540

Query  181  GGVQEMFYMDRNSEIAFLKSRKGFVKIALEAGKPLVPVFCFGQSNVYSWWKPQGKVFLKI  240
            GGVQEMFYMDRNSEIAFLKSRKGFVKIALEAGKPLVPVFCFGQSNVYSWWKPQGKVFLKI
Sbjct  541  GGVQEMFYMDRNSEIAFLKSRKGFVKIALEAGKPLVPVFCFGQSNVYSWWKPQGKVFLKI  720

Query  241  ARVIKFTPIMFWGVFGSPVPFRRPLHVVVGKPILLKKNPQPSVNE  285
            ARVIKFTPIMFWGVFGSPVPFRRPLHVVVGKPILLKKNPQPSVNE
Sbjct  721  ARVIKFTPIMFWGVFGSPVPFRRPLHVVVGKPILLKKNPQPSVNE  855


>AS10g012160.1.1 (joined)
Length=900

 Score = 478 bits (1229),  Expect = 5e-172, Method: Compositional matrix adjust.
 Identities = 264/307 (86%), Positives = 269/307 (88%), Gaps = 29/307 (9%)
 Frame = +1

Query  1    MEGNGELNHHHHQSTESTRAKEFKGQRGPLIPTVLAMFIWLGAIHFNAIVVLASFIFLPI  60
            MEGNGELNHHHHQSTESTRAKEFKGQRGPLIPTVLAMFIWLGAIHFNAIVVLASFIFLPI
Sbjct  1    MEGNGELNHHHHQSTESTRAKEFKGQRGPLIPTVLAMFIWLGAIHFNAIVVLASFIFLPI  180

Query  61   YKAf------------------iviglllvfiliPIEEKSELGRRLSKYICKYASGYFPV  102
            YKAF                   VIGLLLVFILIPIEEKSELGRRLSKYICKYASGYFPV
Sbjct  181  YKAFIGVIFLRHEFCLIYGVNFSVIGLLLVFILIPIEEKSELGRRLSKYICKYASGYFPV  360

Query  103  SLYVEDYEAFDPNQAYAFGYEPHSVLPIGVIAFATFTGFMPLPKIKVLASTAVF----YT  158
            SLYVEDYEAFDPNQAYAFGYEPHSVLPIGVIAFATFTGFMPLPKIKVLASTAV+      
Sbjct  361  SLYVEDYEAFDPNQAYAFGYEPHSVLPIGVIAFATFTGFMPLPKIKVLASTAVWTWLGLA  540

Query  159  PFLRQEKFISLLASGYSCIIVPGGVQEMFYMDRNSEIAFLKSRKGFVKIALEAGKPLVPV  218
            P  R+ KFISLLASGYSCIIVPGG   +       +IAFLKSRKGFVKIALEAGKPLVPV
Sbjct  541  PATRK-KFISLLASGYSCIIVPGGDYPVL------QIAFLKSRKGFVKIALEAGKPLVPV  699

Query  219  FCFGQSNVYSWWKPQGKVFLKIARVIKFTPIMFWGVFGSPVPFRRPLHVVVGKPILLKKN  278
            FCFGQSNVYSWWKPQGKVFLKIARVIKFTPIMFWGVFGSP+PFRRPLHVVVGKPILLKKN
Sbjct  700  FCFGQSNVYSWWKPQGKVFLKIARVIKFTPIMFWGVFGSPLPFRRPLHVVVGKPILLKKN  879

Query  279  PQPSVNE  285
            PQPSVNE
Sbjct  880  PQPSVNE  900



Lambda      K        H        a         alpha
   0.325    0.142    0.444    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2785944603


  Database: Asclepias_syriaca_v0.3_CDs.fa
    Posted date:  Jun 11, 2021  2:00 PM
  Number of letters in database: 58,839,933
  Number of sequences in database:  43,035



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40