BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Asclepias_syriaca_v0.3_proteins.fa
           43,035 sequences; 19,571,512 total letters



Query= Untitled_sequence

Length=465
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

AS06g010300.1.1(joined) (translated)                                  683     0.0  


>AS06g010300.1.1 (joined) (translated)
Length=463

 Score = 683 bits (1763),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 343/466 (74%), Positives = 399/466 (86%), Gaps = 4/466 (1%)

Query  1    MELLDMNSMAASIGVSVAVLRFLLCFVATIPISFLWRFIPSRLGKHIYSAASGAFLSYLS  60
            M L +M +MA++IGVSV VLRFLLCFVATIP+SF  RF+P   G+H+Y+A SGA LSYLS
Sbjct  1    MGLPEMEAMASTIGVSVPVLRFLLCFVATIPVSFFHRFVPGVTGRHLYAAVSGAVLSYLS  60

Query  61   FGFSSNLHFLVPMTIGYASMAIYRPLSGFITFFLGFAYLIGCHVFYMSGDAWKEGGIDST  120
            FGFSSNLHFLVPM +GYASM + R   G IT+FLGF YLIGCHV+YMSGDAWKEGGID+T
Sbjct  61   FGFSSNLHFLVPMLLGYASMVLCRKYCGIITYFLGFGYLIGCHVYYMSGDAWKEGGIDAT  120

Query  121  GALMVLTLKVISCSINYNDGMLKEEGLREAQKKNRLIQMPSLIEYFGYCLCCGSHFAGPV  180
            GALMV+TLK+IS  INYNDG+ KEE LRE+QKKNRLI++PSL+EYFGYCLCCGSHFAGPV
Sbjct  121  GALMVITLKIISAVINYNDGLCKEENLRESQKKNRLIKLPSLLEYFGYCLCCGSHFAGPV  180

Query  181  FEMKDYLEWTEEKGIWAVSEKGKRPSPYGAMIRAVFQAAICMALYLYLVPQFPLTRFTEP  240
            +EMKDYL+W E KGIW  SEKG  PSPY   +RA+ QAA+CM LYLYLVPQFPL+RF  P
Sbjct  181  YEMKDYLDWIERKGIWQPSEKGS-PSPYLPTLRALIQAAVCMGLYLYLVPQFPLSRFNHP  239

Query  241  VYQEWGFLKRFGYQYMAGFTARWKYYFIWSISEASIIISGLGFSGWTDETQTKAKWDRAK  300
            +YQEWGF KR GYQYM+GFTARWKYYFIWSISEASIIISGLGFSGWTD +  K +WDRAK
Sbjct  240  IYQEWGFWKRLGYQYMSGFTARWKYYFIWSISEASIIISGLGFSGWTDSSPHKPRWDRAK  299

Query  301  NVDILGVELAKSAVQIPLFWNIQVSTWLRHYVYERIVKPGKKAGFFQLLATQTVSAVWHG  360
            NVD+LGVELAKS+VQ+PL WNIQVSTWLRHYVY+R+V+ GKK GF QLLATQTVSAVWHG
Sbjct  300  NVDVLGVELAKSSVQLPLVWNIQVSTWLRHYVYDRLVQNGKKPGFLQLLATQTVSAVWHG  359

Query  361  LYPGYIIFFVQSALMIDGSKAIYRWQQAIPPKMAMLRNVLVLINFLYTVVVLNYSSVGFM  420
            LYPGY+IFFVQSALMI GS+ +YRWQQA      +L+N  VL+NF YT++VLNYS VGF+
Sbjct  360  LYPGYLIFFVQSALMIAGSRVLYRWQQAT--STTVLKNFFVLMNFAYTLLVLNYSCVGFL  417

Query  421  VLSLHETLVAFKSVYYIGTVIPIAVLLLSYLV-PVKPVRPKTRKEE  465
            VLSLHETL ++ SVYY+GT+IPI +++LS ++ P KP R K RKE+
Sbjct  418  VLSLHETLASYGSVYYVGTIIPILLIILSKIIKPAKPSRSKARKEQ  463



Lambda      K        H        a         alpha
   0.327    0.141    0.445    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5388518918


  Database: Asclepias_syriaca_v0.3_proteins.fa
    Posted date:  Jun 11, 2021  2:00 PM
  Number of letters in database: 19,571,512
  Number of sequences in database:  43,035



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40