BLASTP 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Asclepias_curassavica_v1.0_proteins.fa 29,120 sequences; 10,986,369 total letters Query= Untitled_sequence Length=380 Score E Sequences producing significant alignments: (Bits) Value AC08g026980.1(joined) (translated) 729 0.0 AC08g026980.2(joined) (translated) 729 0.0 AC04g019470.1(joined) (translated) 632 0.0 AC01g021670.1(joined) (translated) 223 1e-68 AC08g028130.1(joined) (translated) 210 6e-64 AC04g029700.1(joined) (translated) 90.9 4e-20 >AC08g026980.1 (joined) (translated) Length=380 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/380 (90%), Positives = 364/380 (96%), Gaps = 0/380 (0%) Query 1 MGGGGRMSAPTIVSEQTNTLKRVPYQKPPFTLGDIKKAIPPHCFQRSPLRSFSYVIYDLI 60 MGGGGRMS+PT V+E+TN KR PYQKPPFTLGDIK+AIPPHCF+RS L SFSYV+YDLI Sbjct 1 MGGGGRMSSPTTVTEETNPPKRGPYQKPPFTLGDIKRAIPPHCFKRSLLHSFSYVVYDLI 60 Query 61 LVSFFYYIATNYFHLLPSPYCYLAWPIYWIFQGCVCTGVWVIAHECGHHAFSDYQWVDDT 120 LVS FYY+A++YFHLLPSP+CYLAWPIYWI QGCVCTGVWVIAHECGHHAFSDYQWVDDT Sbjct 61 LVSLFYYVASSYFHLLPSPFCYLAWPIYWIVQGCVCTGVWVIAHECGHHAFSDYQWVDDT 120 Query 121 VGLILHSGLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKMPWFSKYLNNPPGRVLT 180 VGLILHS LLVPYFSWK+SHRRHHSNTGSLERDEVFVPKPKSKM WFSKYLN PGRVLT Sbjct 121 VGLILHSALLVPYFSWKHSHRRHHSNTGSLERDEVFVPKPKSKMSWFSKYLNTLPGRVLT 180 Query 181 LIITLTLGWPLYLAFNVSGRHYDRFACHYDPYGPIYNDRERIQIYISDAGVLAACYLLYR 240 L+ITLTLGWPLYLAFNVSGRHYDRFACH+DPYGPIYNDRER QIY+SDAGVLAACYLLYR Sbjct 181 LVITLTLGWPLYLAFNVSGRHYDRFACHFDPYGPIYNDRERRQIYLSDAGVLAACYLLYR 240 Query 241 ITLAKGLIWLICTYGVPLLIVNGFLVLITFLQHTHAALPHYDSSEWDWLRGALATVDRDY 300 +TL KGL+W++C YGVPLLIVNGFLVLIT+LQHTH ALPHYDSSEWDWLRGALATVDRDY Sbjct 241 VTLVKGLVWVVCMYGVPLLIVNGFLVLITYLQHTHVALPHYDSSEWDWLRGALATVDRDY 300 Query 301 GVLNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYYRFDGTPFYKAMWREAKE 360 G+LNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYY+FDGTPFYKAMWREAKE Sbjct 301 GILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYYQFDGTPFYKAMWREAKE 360 Query 361 CLYVEPDEGSKGVFWYQNKF 380 C+YVEPDEGSKGVFWYQNKF Sbjct 361 CVYVEPDEGSKGVFWYQNKF 380 >AC08g026980.2 (joined) (translated) Length=380 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/380 (90%), Positives = 364/380 (96%), Gaps = 0/380 (0%) Query 1 MGGGGRMSAPTIVSEQTNTLKRVPYQKPPFTLGDIKKAIPPHCFQRSPLRSFSYVIYDLI 60 MGGGGRMS+PT V+E+TN KR PYQKPPFTLGDIK+AIPPHCF+RS L SFSYV+YDLI Sbjct 1 MGGGGRMSSPTTVTEETNPPKRGPYQKPPFTLGDIKRAIPPHCFKRSLLHSFSYVVYDLI 60 Query 61 LVSFFYYIATNYFHLLPSPYCYLAWPIYWIFQGCVCTGVWVIAHECGHHAFSDYQWVDDT 120 LVS FYY+A++YFHLLPSP+CYLAWPIYWI QGCVCTGVWVIAHECGHHAFSDYQWVDDT Sbjct 61 LVSLFYYVASSYFHLLPSPFCYLAWPIYWIVQGCVCTGVWVIAHECGHHAFSDYQWVDDT 120 Query 121 VGLILHSGLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKMPWFSKYLNNPPGRVLT 180 VGLILHS LLVPYFSWK+SHRRHHSNTGSLERDEVFVPKPKSKM WFSKYLN PGRVLT Sbjct 121 VGLILHSALLVPYFSWKHSHRRHHSNTGSLERDEVFVPKPKSKMSWFSKYLNTLPGRVLT 180 Query 181 LIITLTLGWPLYLAFNVSGRHYDRFACHYDPYGPIYNDRERIQIYISDAGVLAACYLLYR 240 L+ITLTLGWPLYLAFNVSGRHYDRFACH+DPYGPIYNDRER QIY+SDAGVLAACYLLYR Sbjct 181 LVITLTLGWPLYLAFNVSGRHYDRFACHFDPYGPIYNDRERRQIYLSDAGVLAACYLLYR 240 Query 241 ITLAKGLIWLICTYGVPLLIVNGFLVLITFLQHTHAALPHYDSSEWDWLRGALATVDRDY 300 +TL KGL+W++C YGVPLLIVNGFLVLIT+LQHTH ALPHYDSSEWDWLRGALATVDRDY Sbjct 241 VTLVKGLVWVVCMYGVPLLIVNGFLVLITYLQHTHVALPHYDSSEWDWLRGALATVDRDY 300 Query 301 GVLNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYYRFDGTPFYKAMWREAKE 360 G+LNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYY+FDGTPFYKAMWREAKE Sbjct 301 GILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYYQFDGTPFYKAMWREAKE 360 Query 361 CLYVEPDEGSKGVFWYQNKF 380 C+YVEPDEGSKGVFWYQNKF Sbjct 361 CVYVEPDEGSKGVFWYQNKF 380 >AC04g019470.1 (joined) (translated) Length=383 Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust. Identities = 298/383 (78%), Positives = 329/383 (86%), Gaps = 3/383 (1%) Query 1 MGGGGRMSAPTIVSE-QTNTLKRVPYQKPPFTLGDIKKAIPPHCFQRSPLRSFSYVIYDL 59 MG GGRM+ P +++ L RVP+ KPPF+LG+IKKAIPPHCF+RS L SFSYV +DL Sbjct 1 MGAGGRMNLPQEGKNLKSDVLGRVPHSKPPFSLGEIKKAIPPHCFRRSVLTSFSYVFFDL 60 Query 60 ILVSFFYYIATNYFHLLPSPYCYLAWPIYWIFQGCVCTGVWVIAHECGHHAFSDYQWVDD 119 + FYYIATNY LLP P+ YLAWP+YW QGCV TGVWV+AHECGHHAFSDYQW+DD Sbjct 61 TIAFLFYYIATNYIPLLPHPFAYLAWPLYWFCQGCVLTGVWVVAHECGHHAFSDYQWLDD 120 Query 120 TVGLILHSGLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKMPWFSKYLNNPPGRVL 179 TVGL+LHS LLVPYFSWKYSHRRHHSNTGSLERDEVFVPK KS + WFSKYLNNP GRV+ Sbjct 121 TVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKSDIRWFSKYLNNPAGRVI 180 Query 180 TLIITLTLGWPLYLAFNVSGRHYDRFACHYDPYGPIYNDRERIQIYISDAGVLAACYLLY 239 TL + L LGWPLYL FNVSGRHYDRFACH+DPYGPIY+DRER+QIY+SDAG+ A + LY Sbjct 181 TLAVQLGLGWPLYLMFNVSGRHYDRFACHFDPYGPIYSDRERLQIYLSDAGIFAVTFGLY 240 Query 240 RITLAKGLIWLICTYGVPLLIVNGFLVLITFLQHTHAALPHYDSSEWDWLRGALATVDRD 299 R AKGL W C YG PLLIVNGFLVLITFLQHTH +LPHYDSSEWDWLRGALATVDRD Sbjct 241 RFVAAKGLGWAFCVYGGPLLIVNGFLVLITFLQHTHPSLPHYDSSEWDWLRGALATVDRD 300 Query 300 YGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYYRFDGTPFYKAMWREAK 359 YG+LNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKP+LG+YY+FDGTP + AMWRE K Sbjct 301 YGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGDYYQFDGTPVFNAMWREVK 360 Query 360 ECLYVEPDEG--SKGVFWYQNKF 380 EC+YVEPDEG SKGVFWY NK Sbjct 361 ECIYVEPDEGEQSKGVFWYNNKL 383 >AC01g021670.1 (joined) (translated) Length=455 Score = 223 bits (567), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 134/343 (39%), Positives = 189/343 (55%), Gaps = 22/343 (6%) Query 5 GRMSAPTIVSEQTNTLKRVPYQKPPFTLGDIKKAIPPHCFQRSPLRSFSYVIYDLILVSF 64 G S+ +V E P PPF L DI+ AIP HC+ ++P RS SYV+ D+ +V F Sbjct 84 GSRSSRGVVVEDDGQFD--PGAAPPFKLADIRAAIPKHCWVKNPWRSMSYVVRDVAVV-F 140 Query 65 FYYIATNYFHLLPSPYCYLAWPIYWIFQGCVCTGVWVIAHECGHHAFSDYQWVDDTVGLI 124 A YF+ ++ WP+YW QG + ++V+ H+CGH +FS+ ++ VG + Sbjct 141 GLAAAAAYFN------NWVVWPLYWFAQGTMFWALFVLGHDCGHGSFSNDYNLNSVVGHL 194 Query 125 LHSGLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKMPWFSKYLNNPPGRVLTLIIT 184 LHS +LVPY W+ SHR HH N G +E DE + P + K L+N +T ++ Sbjct 195 LHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEK----IYKSLDN-----VTRLMR 245 Query 185 LTLGWPLYL-AFNVSGRHYDRFACHYDPYGPIYNDRERIQIYISDAGVLAACYLLYRITL 243 TL +PL F + R + HYDP ++ ER I S A LL ++ Sbjct 246 FTLPFPLLAYPFYLWSRSPGKTGSHYDPNSDLFVPSERKDIITSTVCWTAMAALLVGLSF 305 Query 244 AKGLIWLICTYGVPLLIVNGFLVLITFLQH--THAALPHYDSSEWDWLRGALATVDRDYG 301 G + L+ YGVP I +L L+T+L H LP Y EW +LRG L T+DRDYG Sbjct 306 VMGPVQLLKLYGVPYWIFVMWLDLVTYLHHHGHEEKLPWYRGKEWSYLRGGLTTLDRDYG 365 Query 302 VLNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEYYR 344 +N + H+I THV HHLF +PHYH +EAT+A KP+LG+YY+ Sbjct 366 WINNIHHDI-GTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYK 407 >AC08g028130.1 (joined) (translated) Length=437 Score = 210 bits (534), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 130/362 (36%), Positives = 187/362 (52%), Gaps = 44/362 (12%) Query 12 IVSEQTNTLKRV---PYQKPPFTLGDIKKAIPPHCFQRSPLRSFSYVIYDLILVSFFYYI 68 I++ T T V P PPF +G+I+ AIP HC+ + P RS SYV D+ +V+ + Sbjct 39 IMNASTTTTDNVDFDPSAPPPFRIGEIRAAIPEHCWVKDPWRSMSYVARDIWIVAGLVAL 98 Query 69 ATNYFHLLPSPYCYLAWPIYWIFQGCVCTGVWVIAHECGHHAFSDYQWVDDTVGLILHSG 128 A YF C++ WP+YW QG + ++V+ H+CGH +FSD +++ +G ILHS Sbjct 99 AV-YFR-----SCWMFWPVYWAAQGTMFWAIFVLGHDCGHGSFSDSCTLNNIMGHILHSS 152 Query 129 LLVPYFSWKYSHRRHHSNTGSLERDEVFVPKPKSKMPWFSKYLNNPPGRVLTLIITLTLG 188 +LVPY W+ SHR HH N G+++ DE +VP P+ L N + I Sbjct 153 ILVPYHGWRISHRTHHQNHGNVDNDESWVPLPEK----LYNKLENSTKLLRYKIPFPMFA 208 Query 189 WPLYLAFNVSGRHYDRFACHYDPYGPIYNDRERIQIYISDAGVLAACYLLYRITLAKGLI 248 +P+YL + G + H++PY ++ ER + S LL ++ G I Sbjct 209 YPMYLWYRSPG----KTGSHFNPYCELFQPNERKLVVTSTICWTLMVALLSFLSTLIGPI 264 Query 249 WLICTYGVPLLIVN------------------------GFLVLITFLQHT--HAALPHYD 282 ++ YGVP L+ N +L +T+L H LP Y Sbjct 265 QILKYYGVPYLVSNLNFFIPIEIKGNYRRSVLFFQIFVMWLDTVTYLHHHGYERKLPWYR 324 Query 283 SSEWDWLRGALATVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPLLGEY 342 EW +LRG L TVDRDYG N + H+I THV HHLF +PHYH +EATKA K ++G+Y Sbjct 325 GKEWSYLRGGLTTVDRDYGWFNNIHHDI-GTHVIHHLFPQIPHYHLIEATKAAKGVMGKY 383 Query 343 YR 344 YR Sbjct 384 YR 385 >AC04g029700.1 (joined) (translated) Length=446 Score = 90.9 bits (224), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 82/314 (26%), Positives = 146/314 (46%), Gaps = 26/314 (8%) Query 31 TLGDIKKAIPPHCFQRSPLRSFSYVIYDLILVSFFYYIATNYFHLLPSPYCYLAWPIYWI 90 TL D+ + +P F+ +++ V LVS Y F + +P+ L P+ W Sbjct 105 TLKDVIETLPKKVFEIDDTKAWKSV-----LVSVTSY-TLGLFMIAKAPWYLL--PLAWA 156 Query 91 FQGCVCTGVWVIAHECGHHAFSDYQWVDDTVGLILHSGLLVPYFSWKYSHRRHHSNTGSL 150 + G TG +VI H+C H +FS + V+D VG + L+ PY W++ H RHH+ T L Sbjct 157 WTGTAVTGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLIYPYEPWRFKHDRHHAKTNML 216 Query 151 ERDEVFVPKPKSKMPWFSKYLNNPPGRVLTLIITLTLGWPLYLAFNVSGRHYDRFACHYD 210 D + P W ++ ++ TL + G+ + + +S H+ H+D Sbjct 217 HEDTAWQPI------WPEEFDSSS-----TLRKAIIYGYGPFRPW-MSIAHW--LILHFD 262 Query 211 PYGPIYNDRERIQIYISDAGVLAACYLLYRITLAK-GLIWLICTYGVPLLIVNGFLVLIT 269 N+ R++ IS A V A + + + + K G+ I + +P L + ++ T Sbjct 263 LKKFRPNEVSRVK--ISLACVFAFMAIGWPLIIFKAGIAGWIKFWLMPFLGYHFWMSTFT 320 Query 270 FLQHTHAALPHYDSSEWDWLRGAL-ATVDRDYGVLNKVFHNITDTHVAHHLFSTMPHYHA 328 + HT +P S+EW+ + L TV DY ++ + + H+ HH+ +P Y+ Sbjct 321 MVHHTAPHIPFKSSNEWNAAQAQLNGTVHCDYPRWIEILCHDINVHIPHHISPRIPSYNL 380 Query 329 MEATKAIKPLLGEY 342 A K+++ G+Y Sbjct 381 RAAHKSLQENWGKY 394 Lambda K H a alpha 0.326 0.143 0.487 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 2260823320 Database: Asclepias_curassavica_v1.0_proteins.fa Posted date: Apr 9, 2024 2:32 PM Number of letters in database: 10,986,369 Number of sequences in database: 29,120 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40