BLASTP 2.11.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Asclepias_syriaca_v0.3_proteins.fa
           43,035 sequences; 19,571,512 total letters



Query= Untitled_sequence

Length=301
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

AS05g008310.1.1(joined) (translated)                                  342     6e-118


>AS05g008310.1.1 (joined) (translated)
Length=313

 Score = 342 bits (876),  Expect = 6e-118, Method: Compositional matrix adjust.
 Identities = 175/290 (60%), Positives = 209/290 (72%), Gaps = 15/290 (5%)

Query  11   SLRRRSNSLNGNHTN--GVAIDGTLDNN---------NRRVGDTNTHMDISAKKTDNGYA  59
            +L  RS   N  H    G  I G  D+N         +   G+    +   + + D  Y 
Sbjct  15   TLTNRSQKNNTTHHGVVGAIIHGETDSNAAADVIAPSSTGGGEMKKKLIPLSSEKDYNYN  74

Query  60   NGVGGGGWRSKASFTTWTARDIVYVVRYHWIPCMFAAGLLFFMGVEYTLQMIPARSEPFD  119
            N     G+   ASF  W A D++ ++R+H IPC+FAA LLFF+GVEYTL+M+P+ S PFD
Sbjct  75   NH----GFFENASFMRWKAVDVLNLIRWHPIPCIFAASLLFFIGVEYTLRMVPSSSPPFD  130

Query  120  LGFVVTRSLNRVLASSPDLNTVLAALNTVFVGMQTTYIVWTWLVEGRARATIAALFMFTC  179
            LGFVVT  L+R+LAS P+LN+VLA LNTVFVGMQT YI+WTWL+EGR RATI+ALFMFTC
Sbjct  131  LGFVVTLPLHRMLASRPNLNSVLAGLNTVFVGMQTAYILWTWLIEGRPRATISALFMFTC  190

Query  180  RGILGYSTQLPLPQDFLGSGVDFPVGNVSFFLFFSGHVAGSMIASLDMRRMQRLRLAMVF  239
            RGILGY TQLP+P+DFLGSGVDFPVGNVSFFLF+SGHVA S+IASLDM+R QR  L+ +F
Sbjct  191  RGILGYLTQLPVPEDFLGSGVDFPVGNVSFFLFYSGHVAASVIASLDMKRNQRWELSRIF  250

Query  240  DILNVLQSIRLLGTRGHYTIDLAVGVGAGILFDSLAGKYEEMMSKRHLGT  289
            D LN LQ +RLL TRGHYTIDL VGVGAGILFDSLAGKY E  +   L T
Sbjct  251  DTLNALQVVRLLSTRGHYTIDLVVGVGAGILFDSLAGKYLESKTNEALIT  300



Lambda      K        H        a         alpha
   0.324    0.138    0.415    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3021206458


  Database: Asclepias_syriaca_v0.3_proteins.fa
    Posted date:  Jun 11, 2021  2:00 PM
  Number of letters in database: 19,571,512
  Number of sequences in database:  43,035



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40