BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Asclepias_syriaca_v0.3_chromosomes.fa 673 sequences; 317,062,912 total letters Query= Untitled_sequence Length=542 Score E Sequences producing significant alignments: (Bits) Value AS0.3ch11 640 0.0 >AS0.3ch11 Length=22624652 Score = 640 bits (346), Expect = 0.0 Identities = 481/540 (89%), Gaps = 33/540 (6%) Strand=Plus/Plus Query 36 TTGGGTTGTAGGCATGAAATTACTGGAATTATAACGAAGGTAGGGAGCAAGGTTACGAAG 95 |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 15326895 TTGGATTGTAGGCATGAAATTACTGGAATTATAACGAAGATAGGGAGCAATGTTACGAAG 15326954 Query 96 TTCAAGGTAGGAGATAAGGTTGGAGTGGGGTGCCTGGCAGCAACGTGCTTGGAGTGTGAG 155 |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 15326955 TTCAAGGTCGGAGATAAGGTTGGAGTCGGGTGCCTGGCGGCAACGTGCTTGGAGTGTGAA 15327014 Query 156 TTCTGCAAGAACTCACAGGAAAACTACTGTGACAATGTACAGTTCACATACAATGGCATT 215 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 15327015 TTCTGCAAGAACTCACAGGAAAACTACTGTGACAATGTACAGTTCACTTATAATGGTATT 15327074 Query 216 TTCTGGGACGGTAGTATCACTTATGGTGGCTATTCTCACATGCTCGTTGCAGATCACAGG 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15327075 TTCTGGGACGGTAGTATCACTTATGGTGGCTATTCTCACATGCTCGTTGCAGATCACAGG 15327134 Query 276 TCTGAA-T-T-CATTTGCTCCTTTCTAA-TT--AAT--A---A------AA-ATATATAT 317 | | || | | ||||| |||||||||| || ||| | | || ||| || | Sbjct 15327135 TTTCAAATATTCATTTCTTCCTTTCTAAATTCTAATCGATCGATTTTGTAACATAAATGT 15327194 Query 318 --AT-A-T---A-CATT-T--G----TGCAGATATGTGGTTCATGTGCCAGATAGTTTGC 362 || | | | |||| | | |||||||||||||||||||||||||||||||||| Sbjct 15327195 TTATTAATTGTAACATTATATGTTGTTGCAGATATGTGGTTCATGTGCCAGATAGTTTGC 15327254 Query 363 CAATGGATGCAGCGGCACCACTGTTATGTGCGGGAATAACAGTGTACTGCCCAATGAAAG 422 ||||||||||||||||||| || || ||||| |||||||| ||||||||||||||||||| Sbjct 15327255 CAATGGATGCAGCGGCACCGCTTTTGTGTGCAGGAATAACTGTGTACTGCCCAATGAAAG 15327314 Query 423 ATGAGAAATTGCTGGAGGAATCATCAGAAAGGAAGAATGTTGGTGTAGTTGGACTGGGAG 482 | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 15327315 ACGAGAAATTGCTGGAGGAATCATCAGCAAGGAAGAATGTTGGTGTAGTTGGTCTGGGAG 15327374 Query 483 GTTTGGGTCACGTGGCTGTCAAATTTGCCAAAGCCTTCGGTCACCATGTCACTATTATCA 542 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 15327375 GTTTGGGTCACGTGGCTGTCAAATTTGCCAAGGCGTTCGGTCACCATGTCACTATTATCA 15327434 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 163278041615 Database: Asclepias_syriaca_v0.3_chromosomes.fa Posted date: Jun 11, 2021 1:59 PM Number of letters in database: 317,062,912 Number of sequences in database: 673 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5